Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AC018665.1-201ENST00000622927 1362 ntBASIC16.56■□□□□ 0.24
CLCN1P35523 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AGGF1P10-201ENST00000635005 2191 ntBASIC16.56■□□□□ 0.24
CLCN1P35523 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AC104457.1-201ENST00000401024 814 ntBASIC16.56■□□□□ 0.24
CLCN1P35523 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN1P35523 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN1P35523 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCN1P35523 AL645728.2-202ENST00000641679 227 ntBASIC16.56■□□□□ 0.24
CLCN1P35523 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AC010536.1-201ENST00000538868 2611 ntBASIC16.56■□□□□ 0.24
CLCN1P35523 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 AC115284.2-201ENST00000624646 2054 ntBASIC16.55■□□□□ 0.24
CLCN1P35523 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCN1P35523 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLCN1P35523 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 LILRP1-201ENST00000444199 1370 ntBASIC16.55■□□□□ 0.24
CLCN1P35523 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLCN1P35523 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN1P35523 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN1P35523 AC006213.4-201ENST00000616184 634 ntBASIC16.55■□□□□ 0.24
CLCN1P35523 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN1P35523 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCN1P35523 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN1P35523 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN1P35523 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms