Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 AL033527.5-202ENST00000641632 1098 ntBASIC10.72□□□□□ -0.69
CKS2P33552 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.72□□□□□ -0.69
CKS2P33552 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.72□□□□□ -0.69
CKS2P33552 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
CKS2P33552 DLX4-206ENST00000611342 1662 ntBASIC10.72□□□□□ -0.69
CKS2P33552 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
CKS2P33552 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS2P33552 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.72□□□□□ -0.69
CKS2P33552 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
CKS2P33552 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CKS2P33552 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 FAM95B1-212ENST00000592873 4692 ntBASIC10.71□□□□□ -0.69
CKS2P33552 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CKS2P33552 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS2P33552 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 YBX2P1-201ENST00000394192 760 ntBASIC10.71□□□□□ -0.69
CKS2P33552 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 CES1P1-201ENST00000421606 1704 ntBASIC10.71□□□□□ -0.69
CKS2P33552 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS2P33552 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.71□□□□□ -0.69
CKS2P33552 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.71□□□□□ -0.69
CKS2P33552 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.71□□□□□ -0.69
CKS2P33552 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.71□□□□□ -0.69
CKS2P33552 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
CKS2P33552 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.71□□□□□ -0.69
CKS2P33552 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 MRPL37P1-201ENST00000592451 1337 ntBASIC10.71□□□□□ -0.69
CKS2P33552 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.71□□□□□ -0.69
CKS2P33552 AL589739.1-201ENST00000607720 493 ntBASIC10.71□□□□□ -0.69
CKS2P33552 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CKS2P33552 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CKS2P33552 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CKS2P33552 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CKS2P33552 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS2P33552 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CKS2P33552 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS2P33552 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC10.71□□□□□ -0.7
CKS2P33552 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
CKS2P33552 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CKS2P33552 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms