Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 KRT8P35-201ENST00000483942 1338 ntBASIC14.69□□□□□ -0.06
CCND1P24385 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.69□□□□□ -0.06
CCND1P24385 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 RN7SL692P-201ENST00000464677 288 ntBASIC14.69□□□□□ -0.06
CCND1P24385 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.69□□□□□ -0.06
CCND1P24385 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.69□□□□□ -0.06
CCND1P24385 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 AL137783.1-201ENST00000623494 1896 ntBASIC14.69□□□□□ -0.06
CCND1P24385 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.69□□□□□ -0.06
CCND1P24385 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCND1P24385 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCND1P24385 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 CU639417.3-201ENST00000624240 1404 ntBASIC14.68□□□□□ -0.06
CCND1P24385 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.68□□□□□ -0.06
CCND1P24385 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.68□□□□□ -0.06
CCND1P24385 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.68□□□□□ -0.06
CCND1P24385 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.68□□□□□ -0.06
CCND1P24385 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 AC007389.4-201ENST00000454674 793 ntBASIC14.68□□□□□ -0.06
CCND1P24385 AC093433.1-201ENST00000458048 571 ntBASIC14.68□□□□□ -0.06
CCND1P24385 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.68□□□□□ -0.06
CCND1P24385 AC015936.2-201ENST00000593177 259 ntBASIC14.68□□□□□ -0.06
CCND1P24385 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.68□□□□□ -0.06
CCND1P24385 AC010319.3-201ENST00000597028 470 ntBASIC14.68□□□□□ -0.06
CCND1P24385 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.68□□□□□ -0.06
CCND1P24385 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCND1P24385 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCND1P24385 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms