Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 AC108734.2-201ENST00000420887 1069 ntBASIC16.17■□□□□ 0.18
HOXC6P09630 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 AC006529.1-201ENST00000459978 637 ntBASIC16.17■□□□□ 0.18
HOXC6P09630 RN7SL788P-201ENST00000460504 316 ntBASIC16.17■□□□□ 0.18
HOXC6P09630 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.17■□□□□ 0.18
HOXC6P09630 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.17■□□□□ 0.18
HOXC6P09630 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXC6P09630 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 AC145285.5-201ENST00000562217 361 ntBASIC16.17■□□□□ 0.18
HOXC6P09630 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HOXC6P09630 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 AC018529.2-202ENST00000611482 3087 ntBASIC16.17■□□□□ 0.18
HOXC6P09630 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HOXC6P09630 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 FUCA1P1-201ENST00000374476 1351 ntBASIC16.16■□□□□ 0.18
HOXC6P09630 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
HOXC6P09630 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
HOXC6P09630 CCT8L1P-201ENST00000465400 1674 ntBASIC16.16■□□□□ 0.18
HOXC6P09630 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC6P09630 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXC6P09630 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXC6P09630 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXC6P09630 AC006483.2-201ENST00000609813 515 ntBASIC16.16■□□□□ 0.18
HOXC6P09630 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.16■□□□□ 0.18
HOXC6P09630 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC6P09630 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HOXC6P09630 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC6P09630 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC6P09630 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC6P09630 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXC6P09630 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC6P09630 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HOXC6P09630 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC6P09630 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HOXC6P09630 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC6P09630 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXC6P09630 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC6P09630 AC005740.1-201ENST00000515639 522 ntBASIC16.15■□□□□ 0.18
HOXC6P09630 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.15■□□□□ 0.18
HOXC6P09630 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.15■□□□□ 0.18
HOXC6P09630 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
HOXC6P09630 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC6P09630 KLF17P1-201ENST00000547105 1126 ntBASIC16.15■□□□□ 0.18
HOXC6P09630 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.15■□□□□ 0.18
HOXC6P09630 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms