Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
LCA5LO95447 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.37■□□□□ 0.05
LCA5LO95447 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
LCA5LO95447 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.37■□□□□ 0.05
LCA5LO95447 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.37■□□□□ 0.05
LCA5LO95447 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LCA5LO95447 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LCA5LO95447 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LCA5LO95447 AL645933.1-201ENST00000440087 609 ntBASIC15.36■□□□□ 0.05
LCA5LO95447 CHMP1AP1-201ENST00000445563 662 ntBASIC15.36■□□□□ 0.05
LCA5LO95447 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
LCA5LO95447 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.36■□□□□ 0.05
LCA5LO95447 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.36■□□□□ 0.05
LCA5LO95447 SHC1P1-201ENST00000425230 1745 ntBASIC15.36■□□□□ 0.05
LCA5LO95447 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 AC019294.4-201ENST00000561777 2905 ntBASIC15.36■□□□□ 0.05
LCA5LO95447 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.36■□□□□ 0.05
LCA5LO95447 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LCA5LO95447 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCA5LO95447 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 AC007952.5-201ENST00000572818 1486 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 CNN2P8-201ENST00000421872 913 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.35■□□□□ 0.05
LCA5LO95447 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 AL157407.1-201ENST00000435784 904 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 AL355864.2-201ENST00000447420 863 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.35■□□□□ 0.05
LCA5LO95447 COX5BP1-201ENST00000507622 393 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.35■□□□□ 0.05
LCA5LO95447 AL591163.1-201ENST00000641757 987 ntBASIC15.35■□□□□ 0.05
LCA5LO95447 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.35■□□□□ 0.05
LCA5LO95447 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCA5LO95447 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms