Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 AL591122.2-201ENST00000624125 1853 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.62□□□□□ -0.23
TRIM3O75382 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.62□□□□□ -0.23
TRIM3O75382 HIST2H2BB-201ENST00000449108 381 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 PFN1P12-201ENST00000455938 534 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM3O75382 AC108725.1-201ENST00000495472 409 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM3O75382 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
TRIM3O75382 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 MIR4683-201ENST00000579659 81 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 AC091271.1-201ENST00000611877 1162 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRIM3O75382 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AC020910.5-201ENST00000623668 1865 ntBASIC13.61□□□□□ -0.23
TRIM3O75382 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AL731571.1-201ENST00000617058 5428 ntBASIC13.61□□□□□ -0.23
TRIM3O75382 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM3O75382 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AL591846.1-201ENST00000451736 433 ntBASIC13.61□□□□□ -0.23
TRIM3O75382 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM3O75382 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM3O75382 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM3O75382 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 AC092053.3-201ENST00000641308 4975 ntBASIC13.61□□□□□ -0.23
TRIM3O75382 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM3O75382 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM3O75382 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM3O75382 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 SALL4P5-201ENST00000419001 1760 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 AC009093.2-202ENST00000620513 2079 ntBASIC13.6□□□□□ -0.23
TRIM3O75382 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM3O75382 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM3O75382 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms