Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
ATP2A1O14983 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 HLA-DMA-203ENST00000395305 777 ntBASIC16.52■□□□□ 0.24
ATP2A1O14983 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A1O14983 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 AC073869.2-201ENST00000417338 1026 ntBASIC16.52■□□□□ 0.24
ATP2A1O14983 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.52■□□□□ 0.24
ATP2A1O14983 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
ATP2A1O14983 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A1O14983 MIR4750-201ENST00000584564 56 ntBASIC16.52■□□□□ 0.24
ATP2A1O14983 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A1O14983 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A1O14983 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A1O14983 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ATP2A1O14983 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.52■□□□□ 0.23
ATP2A1O14983 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ATP2A1O14983 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.52■□□□□ 0.23
ATP2A1O14983 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
ATP2A1O14983 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A1O14983 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 AC064801.2-201ENST00000625052 1303 ntBASIC16.51■□□□□ 0.23
ATP2A1O14983 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
ATP2A1O14983 OR8T1P-201ENST00000421347 918 ntBASIC16.51■□□□□ 0.23
ATP2A1O14983 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.51■□□□□ 0.23
ATP2A1O14983 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.51■□□□□ 0.23
ATP2A1O14983 TMCO5B-205ENST00000530020 894 ntBASIC16.51■□□□□ 0.23
ATP2A1O14983 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A1O14983 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A1O14983 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 AC067750.1-201ENST00000608826 6545 ntBASIC16.51■□□□□ 0.23
ATP2A1O14983 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A1O14983 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A1O14983 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A1O14983 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 MIR645-201ENST00000385283 94 ntBASIC16.5■□□□□ 0.23
ATP2A1O14983 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 AL512306.1-201ENST00000432698 848 ntBASIC16.5■□□□□ 0.23
ATP2A1O14983 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms