Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 Z93015.1-201ENST00000451718 390 ntBASIC14.59□□□□□ -0.07
CFAP99D6REC4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.59□□□□□ -0.07
CFAP99D6REC4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 MYADML-201ENST00000474610 2147 ntBASIC14.59□□□□□ -0.07
CFAP99D6REC4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CFAP99D6REC4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP99D6REC4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP99D6REC4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.07
CFAP99D6REC4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CFAP99D6REC4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP99D6REC4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP99D6REC4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP99D6REC4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.58□□□□□ -0.07
CFAP99D6REC4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CFAP99D6REC4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.58□□□□□ -0.07
CFAP99D6REC4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP99D6REC4 CICP8-201ENST00000455800 2813 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AC015818.8-201ENST00000587907 1519 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 BNIP3P41-202ENST00000616656 861 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AL590440.2-201ENST00000641973 1595 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 LINC01230-201ENST00000625222 3017 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CFAP99D6REC4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 AC009093.10-201ENST00000641956 1442 ntBASIC14.58□□□□□ -0.08
CFAP99D6REC4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP99D6REC4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP99D6REC4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.57□□□□□ -0.08
CFAP99D6REC4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP99D6REC4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP99D6REC4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.57□□□□□ -0.08
CFAP99D6REC4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms