Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AC015936.2-201ENST00000593177 259 ntBASIC13.34□□□□□ -0.27
CENPBD1B2RD01 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AGGF1P1-201ENST00000509500 2073 ntBASIC13.34□□□□□ -0.27
CENPBD1B2RD01 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CENPBD1B2RD01 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CENPBD1B2RD01 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 AC245100.3-201ENST00000441281 285 ntBASIC13.33□□□□□ -0.28
CENPBD1B2RD01 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 AC022447.6-201ENST00000515522 438 ntBASIC13.33□□□□□ -0.28
CENPBD1B2RD01 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 AC068587.3-201ENST00000526613 355 ntBASIC13.33□□□□□ -0.28
CENPBD1B2RD01 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 MIR5189-201ENST00000577370 114 ntBASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 AC134312.5-201ENST00000568031 1313 ntBASIC13.33□□□□□ -0.28
CENPBD1B2RD01 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CENPBD1B2RD01 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 BX324167.2-201ENST00000623717 3316 ntBASIC13.32□□□□□ -0.28
CENPBD1B2RD01 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPBD1B2RD01 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms