Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC015818.1-201ENST00000451011 244 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 GULOP-201ENST00000454030 748 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 AP005117.1-202ENST00000581724 1908 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 DNM1P46-202ENST00000415963 882 ntBASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 CRIP1P2-201ENST00000425396 228 ntBASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AL031673.1-201ENST00000611460 466 ntBASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AC134878.2-201ENST00000620700 1265 ntBASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 AC106785.2-201ENST00000564385 1319 ntBASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM88BA6NKF7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AC008620.2-201ENST00000510294 1569 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 OR7E155P-201ENST00000412208 1014 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AC069421.1-201ENST00000447462 323 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 RNA5SP288-201ENST00000516075 93 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 PCTP-206ENST00000573500 919 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 BOLA3P2-201ENST00000586496 323 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AC123912.6-201ENST00000612657 315 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms