Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC78A2IDD5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 KRT17P8-201ENST00000540749 863 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 SNX29P1-201ENST00000548357 1007 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 AL358472.3-201ENST00000608147 415 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 BX088702.1-201ENST00000610784 235 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 AL590440.2-201ENST00000641973 1595 ntBASIC14.77□□□□□ -0.05
CCDC78A2IDD5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC78A2IDD5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ANKRD19P-201ENST00000338192 862 ntBASIC14.76□□□□□ -0.05
CCDC78A2IDD5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 RAB43P1-201ENST00000561790 589 ntBASIC14.76□□□□□ -0.05
CCDC78A2IDD5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC78A2IDD5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms