Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 AL589987.1-201ENST00000453380 819 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 AL603764.1-201ENST00000636452 321 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV18A0A075B6X5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 RNU1-114P-201ENST00000365297 166 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AC114812.1-204ENST00000449669 728 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 GIMAP3P-201ENST00000495150 836 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AC069120.2-201ENST00000524091 540 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 MIR3687-2-201ENST00000577708 61 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 SPDYE22P-201ENST00000582158 798 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AL662799.1-202ENST00000614205 422 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 MIR3687-1-201ENST00000614492 61 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 AL138725.1-201ENST00000407347 1314 ntBASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV18A0A075B6X5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV18A0A075B6X5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms