Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 KRT8P24-201ENST00000560290 1559 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 KRT8P35-201ENST00000483942 1338 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 C2orf27AP3-201ENST00000434123 579 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 FAM86HP-204ENST00000513466 959 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AL354718.3-201ENST00000616414 581 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CR382287.1-201ENST00000623954 586 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AC008687.7-202ENST00000637404 953 ntBASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX49Q9Y6V7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AGGF1P1-201ENST00000509500 2073 ntBASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 MIR1202-201ENST00000408529 83 ntBASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AC243960.2-201ENST00000600996 747 ntBASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AP005019.2-201ENST00000615104 511 ntBASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 AC012617.1-204ENST00000586340 2305 ntBASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DDX49Q9Y6V7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 INE2-201ENST00000630399 1874 ntBASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX49Q9Y6V7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms