Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4S1Q9Y587 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4S1Q9Y587 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4S1Q9Y587 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4S1Q9Y587 LINC02486-201ENST00000604157 3000 ntBASIC13.77□□□□□ -0.21
AP4S1Q9Y587 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4S1Q9Y587 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AL139094.1-201ENST00000405549 1188 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 HTR5BP-201ENST00000430851 1154 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC022616.1-201ENST00000518688 554 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AC107373.2-201ENST00000607735 490 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 BAP1-211ENST00000615113 489 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 CICP1-201ENST00000416803 2410 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 AL022313.4-201ENST00000562756 2046 ntBASIC13.76□□□□□ -0.21
AP4S1Q9Y587 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4S1Q9Y587 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 LINC00567-201ENST00000569854 3409 ntBASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AC009078.2-202ENST00000463353 338 ntBASIC13.75□□□□□ -0.21
AP4S1Q9Y587 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AC026410.3-201ENST00000514280 936 ntBASIC13.75□□□□□ -0.21
AP4S1Q9Y587 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 AC138761.1-201ENST00000584393 385 ntBASIC13.75□□□□□ -0.21
AP4S1Q9Y587 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.75□□□□□ -0.21
AP4S1Q9Y587 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms