Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 MTHFR-210ENST00000641407 2387 ntBASIC15.39■□□□□ 0.05
CD248Q9HCU0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD248Q9HCU0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 LRRC59-203ENST00000576448 1531 ntBASIC15.38■□□□□ 0.05
CD248Q9HCU0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 AC073413.1-201ENST00000603927 732 ntBASIC15.38■□□□□ 0.05
CD248Q9HCU0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 AC138028.6-201ENST00000616106 1482 ntBASIC15.38■□□□□ 0.05
CD248Q9HCU0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.38■□□□□ 0.05
CD248Q9HCU0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD248Q9HCU0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 POM121L10P-201ENST00000436994 1285 ntBASIC15.37■□□□□ 0.05
CD248Q9HCU0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ACTG1P17-201ENST00000558391 1119 ntBASIC15.37■□□□□ 0.05
CD248Q9HCU0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 AC244452.3-201ENST00000636814 210 ntBASIC15.37■□□□□ 0.05
CD248Q9HCU0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 AL591122.2-201ENST00000624125 1853 ntBASIC15.37■□□□□ 0.05
CD248Q9HCU0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.37■□□□□ 0.05
CD248Q9HCU0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD248Q9HCU0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms