Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 Z98257.2-202ENST00000641138 1548 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 KRT8P48-201ENST00000515599 1220 ntBASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 IGHV3-22-201ENST00000520721 359 ntBASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 AC025048.3-201ENST00000590609 569 ntBASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 AC005702.4-201ENST00000618393 416 ntBASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC22CQ9BRL7 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 FP325330.2-201ENST00000624219 5630 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 TOMM22P5-201ENST00000416399 439 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 Z83851.2-201ENST00000609564 659 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 AC091812.2-201ENST00000619081 385 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 SALL4P5-201ENST00000419001 1760 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 AC026271.4-201ENST00000578214 1833 ntBASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEC22CQ9BRL7 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC22CQ9BRL7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms