Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RN7SL173P-201ENST00000461853 292 ntBASIC15.61■□□□□ 0.09
LRCH3Q96II8 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.61■□□□□ 0.09
LRCH3Q96II8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC091304.3-201ENST00000566500 716 ntBASIC15.61■□□□□ 0.09
LRCH3Q96II8 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SIGLEC22P-201ENST00000599104 714 ntBASIC15.61■□□□□ 0.09
LRCH3Q96II8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRCH3Q96II8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.61■□□□□ 0.09
LRCH3Q96II8 AC040160.2-201ENST00000623816 1675 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 CICP13-201ENST00000422015 2789 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AC023157.3-201ENST00000619086 2088 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 GEMIN8P4-201ENST00000380526 729 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 MIR645-201ENST00000385283 94 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 SLC25A15P1-201ENST00000456738 342 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 SLC25A15P3-201ENST00000505530 290 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRCH3Q96II8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 AHCYP4-201ENST00000419201 1315 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.6■□□□□ 0.09
LRCH3Q96II8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRCH3Q96II8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms