Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AP005212.2-201ENST00000584979 510 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SIGLEC18P-201ENST00000602271 909 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 HMGB1P24-201ENST00000611897 328 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 FAM86KP-201ENST00000509817 987 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC090857.1-201ENST00000527400 390 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 CYP2T1P-202ENST00000641596 2535 ntBASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.2□□□□□ -0.3
RP1L1Q8IWN7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 C18orf15-201ENST00000623680 2534 ntBASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 MARK2P16-201ENST00000605714 1723 ntBASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.19□□□□□ -0.3
RP1L1Q8IWN7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms