Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 KLF2P2-201ENST00000416807 1039 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AC244093.1-201ENST00000610837 814 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AL356585.2-201ENST00000625078 2396 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AHCYP2-201ENST00000430630 1300 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 AL138709.1-201ENST00000614840 1693 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 AL122018.1-201ENST00000446607 2310 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 REXO1L2P-201ENST00000425429 2069 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 AC006001.1-201ENST00000325130 474 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 ACTBP8-201ENST00000403258 1108 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 Z93015.1-201ENST00000451718 390 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 FAM86HP-204ENST00000513466 959 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 CD74-212ENST00000524315 584 ntTSL 5 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SCXQ7RTU7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 HNRNPA1P48-202ENST00000565308 961 ntBASIC9.73□□□□□ -0.85
SCXQ7RTU7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.73□□□□□ -0.85
SCXQ7RTU7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms