Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 KRT18P36-201ENST00000411618 1276 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AC078875.1-201ENST00000431907 724 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AC022217.1-201ENST00000521069 738 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AC009779.1-201ENST00000551138 283 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AC015802.1-201ENST00000588104 1449 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 AP001267.2-201ENST00000532619 2086 ntBASIC13.94□□□□□ -0.18
RNF44Q7L0R7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RNF44Q7L0R7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 EIF4HP1-201ENST00000453115 687 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AKR7A2P1-201ENST00000460134 915 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AC103810.3-201ENST00000583567 96 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AL645939.5-201ENST00000606834 243 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 DMBT1P1-203ENST00000636837 4628 ntBASIC13.93□□□□□ -0.18
RNF44Q7L0R7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF44Q7L0R7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms