Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDCA8Q53HL2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 OR2K2-202ENST00000374428 1038 ntBASIC19.85■□□□□ 0.77
CDCA8Q53HL2 MIR557-201ENST00000385239 98 ntBASIC19.85■□□□□ 0.77
CDCA8Q53HL2 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 MIR3677-201ENST00000578964 60 ntBASIC19.85■□□□□ 0.77
CDCA8Q53HL2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 AC012617.1-204ENST00000586340 2305 ntBASIC19.85■□□□□ 0.77
CDCA8Q53HL2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA8Q53HL2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 AP000358.1-201ENST00000456260 156 ntBASIC19.84■□□□□ 0.77
CDCA8Q53HL2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA8Q53HL2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 TCAM1P-207ENST00000485295 1537 ntBASIC19.83■□□□□ 0.77
CDCA8Q53HL2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 MARK2P16-201ENST00000605714 1723 ntBASIC19.83■□□□□ 0.77
CDCA8Q53HL2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 OR8T1P-201ENST00000421347 918 ntBASIC19.83■□□□□ 0.77
CDCA8Q53HL2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 RNA5SP423-201ENST00000517127 109 ntBASIC19.83■□□□□ 0.77
CDCA8Q53HL2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 AL133499.1-201ENST00000596207 608 ntBASIC19.83■□□□□ 0.77
CDCA8Q53HL2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
CDCA8Q53HL2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA8Q53HL2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC19.83■□□□□ 0.76
CDCA8Q53HL2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CDCA8Q53HL2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms