Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 SNORD3B-2-202ENST00000571722 791 ntBASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC144BQ3MJ40 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 OR2I1P-210ENST00000642037 4691 ntBASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 RN7SKP214-201ENST00000364208 315 ntBASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 FAM58BP-201ENST00000439056 645 ntBASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 MIR5572-201ENST00000583188 137 ntBASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC144BQ3MJ40 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AC006335.1-201ENST00000445200 547 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 KLF2P1-201ENST00000447438 1042 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AC020922.3-201ENST00000595064 547 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AC132192.2-201ENST00000596206 1147 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AL132994.2-201ENST00000603120 687 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 U62317.3-201ENST00000608319 855 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AL138725.1-201ENST00000407347 1314 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 AL161772.1-201ENST00000610494 4412 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 PCDHA3-202ENST00000532566 4594 ntBASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC144BQ3MJ40 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC144BQ3MJ40 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC144BQ3MJ40 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC144BQ3MJ40 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC144BQ3MJ40 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC144BQ3MJ40 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms