Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC18.67■□□□□ 0.58
COL16A1Q07092 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 AC026691.1-201ENST00000602502 2017 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL16A1Q07092 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 MIR766-201ENST00000390223 111 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.67■□□□□ 0.58
COL16A1Q07092 OR52X1P-201ENST00000446117 914 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
COL16A1Q07092 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL16A1Q07092 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.67■□□□□ 0.58
COL16A1Q07092 AL158032.2-201ENST00000616818 195 ntBASIC18.67■□□□□ 0.58
COL16A1Q07092 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 RN7SL646P-201ENST00000492969 297 ntBASIC18.66■□□□□ 0.58
COL16A1Q07092 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 AP001102.1-201ENST00000528959 409 ntBASIC18.66■□□□□ 0.58
COL16A1Q07092 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL16A1Q07092 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.66■□□□□ 0.58
COL16A1Q07092 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.66■□□□□ 0.58
COL16A1Q07092 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.65■□□□□ 0.58
COL16A1Q07092 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC18.65■□□□□ 0.58
COL16A1Q07092 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 RPSAP61-201ENST00000412542 878 ntBASIC18.65■□□□□ 0.58
COL16A1Q07092 CLK2P1-201ENST00000416636 1294 ntBASIC18.65■□□□□ 0.58
COL16A1Q07092 TMEM256P1-201ENST00000430550 340 ntBASIC18.65■□□□□ 0.58
COL16A1Q07092 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.65■□□□□ 0.58
COL16A1Q07092 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC18.65■□□□□ 0.58
COL16A1Q07092 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC18.65■□□□□ 0.58
COL16A1Q07092 PSME3-213ENST00000592169 826 ntTSL 3 BASIC18.65■□□□□ 0.58
COL16A1Q07092 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 SNORA50D-202ENST00000627561 132 ntBASIC18.65■□□□□ 0.58
COL16A1Q07092 RN7SL832P-201ENST00000607781 1756 ntBASIC18.65■□□□□ 0.58
COL16A1Q07092 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.65■□□□□ 0.58
COL16A1Q07092 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL16A1Q07092 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL16A1Q07092 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL16A1Q07092 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms