Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 GNRHR2-203ENST00000581100 1187 ntBASIC13.8□□□□□ -0.2
CASP9P55211 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.8□□□□□ -0.2
CASP9P55211 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.8□□□□□ -0.2
CASP9P55211 AL008721.1-201ENST00000609964 604 ntBASIC13.8□□□□□ -0.2
CASP9P55211 AC025048.6-201ENST00000634326 1161 ntBASIC13.8□□□□□ -0.2
CASP9P55211 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CASP9P55211 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CASP9P55211 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CASP9P55211 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CASP9P55211 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CASP9P55211 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CASP9P55211 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CASP9P55211 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CASP9P55211 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CASP9P55211 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.8□□□□□ -0.2
CASP9P55211 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.8□□□□□ -0.2
CASP9P55211 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CASP9P55211 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CASP9P55211 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 AL359881.3-201ENST00000602640 1721 ntBASIC13.79□□□□□ -0.2
CASP9P55211 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 KHSRPP1-201ENST00000427983 1768 ntBASIC13.79□□□□□ -0.2
CASP9P55211 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 OR8S1-201ENST00000310194 1080 ntBASIC13.79□□□□□ -0.2
CASP9P55211 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 RN7SL692P-201ENST00000464677 288 ntBASIC13.79□□□□□ -0.2
CASP9P55211 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.79□□□□□ -0.2
CASP9P55211 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.79□□□□□ -0.2
CASP9P55211 MIR497HG-202ENST00000572453 3838 ntBASIC13.79□□□□□ -0.2
CASP9P55211 MIR4683-201ENST00000579659 81 ntBASIC13.79□□□□□ -0.2
CASP9P55211 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.79□□□□□ -0.2
CASP9P55211 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CASP9P55211 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 FAM90A12P-201ENST00000519497 2375 ntBASIC13.79□□□□□ -0.2
CASP9P55211 FAM90A24P-201ENST00000520792 2369 ntBASIC13.79□□□□□ -0.2
CASP9P55211 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CASP9P55211 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CASP9P55211 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.79□□□□□ -0.2
CASP9P55211 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CASP9P55211 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.78□□□□□ -0.2
CASP9P55211 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CASP9P55211 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CASP9P55211 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.78□□□□□ -0.2
CASP9P55211 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CASP9P55211 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CASP9P55211 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms