Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 ATP5G2P4-201ENST00000442175 420 ntBASIC12.96□□□□□ -0.33
CSNK1A1P48729 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 AC119751.2-201ENST00000504529 210 ntBASIC12.96□□□□□ -0.33
CSNK1A1P48729 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CSNK1A1P48729 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CSNK1A1P48729 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSNK1A1P48729 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.96□□□□□ -0.34
CSNK1A1P48729 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSNK1A1P48729 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.96□□□□□ -0.34
CSNK1A1P48729 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CSNK1A1P48729 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSNK1A1P48729 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CSNK1A1P48729 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.95□□□□□ -0.34
CSNK1A1P48729 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 AC100827.2-201ENST00000563214 1194 ntBASIC12.95□□□□□ -0.34
CSNK1A1P48729 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 MIR6720-201ENST00000611664 98 ntBASIC12.95□□□□□ -0.34
CSNK1A1P48729 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 AC020910.6-201ENST00000623084 1459 ntBASIC12.95□□□□□ -0.34
CSNK1A1P48729 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSNK1A1P48729 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CSNK1A1P48729 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms