Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN1P35523 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN1P35523 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN1P35523 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN1P35523 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN1P35523 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
CLCN1P35523 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CLCN1P35523 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN1P35523 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.58■□□□□ 0.25
CLCN1P35523 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN1P35523 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN1P35523 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CLCN1P35523 PMS2P2-201ENST00000425039 1128 ntBASIC16.58■□□□□ 0.24
CLCN1P35523 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN1P35523 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCN1P35523 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 MEIS3P1-201ENST00000495167 958 ntBASIC16.58■□□□□ 0.24
CLCN1P35523 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCN1P35523 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN1P35523 AC135586.1-201ENST00000539323 574 ntBASIC16.58■□□□□ 0.24
CLCN1P35523 TIMM17BP1-201ENST00000545713 516 ntBASIC16.58■□□□□ 0.24
CLCN1P35523 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 SRD5A3P1-201ENST00000603021 949 ntBASIC16.58■□□□□ 0.24
CLCN1P35523 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN1P35523 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN1P35523 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN1P35523 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLCN1P35523 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN1P35523 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCN1P35523 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCN1P35523 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 AC010970.1-201ENST00000445125 1848 ntBASIC16.57■□□□□ 0.24
CLCN1P35523 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 CLK3P2-201ENST00000427566 1453 ntBASIC16.57■□□□□ 0.24
CLCN1P35523 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN1P35523 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
CLCN1P35523 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN1P35523 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLCN1P35523 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLCN1P35523 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCN1P35523 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 AL158212.4-201ENST00000624062 1286 ntBASIC16.57■□□□□ 0.24
CLCN1P35523 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CLCN1P35523 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN1P35523 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN1P35523 PCDHA6-201ENST00000378126 3267 ntBASIC16.57■□□□□ 0.24
CLCN1P35523 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN1P35523 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN1P35523 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN1P35523 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms