Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFC1P35251 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
RFC1P35251 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFC1P35251 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
RFC1P35251 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFC1P35251 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFC1P35251 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFC1P35251 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.33■□□□□ 0.04
RFC1P35251 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.33■□□□□ 0.04
RFC1P35251 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 AP005482.1-201ENST00000563722 1273 ntBASIC15.33■□□□□ 0.04
RFC1P35251 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 AC132192.2-201ENST00000596206 1147 ntBASIC15.33■□□□□ 0.04
RFC1P35251 AC009955.4-201ENST00000597192 544 ntBASIC15.33■□□□□ 0.04
RFC1P35251 COX11-210ENST00000639671 696 ntBASIC15.33■□□□□ 0.04
RFC1P35251 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.33■□□□□ 0.04
RFC1P35251 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC1P35251 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFC1P35251 TMBIM7P-202ENST00000641474 1516 ntBASIC15.33■□□□□ 0.04
RFC1P35251 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFC1P35251 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 AL161932.2-201ENST00000435436 679 ntBASIC15.32■□□□□ 0.04
RFC1P35251 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC1P35251 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC1P35251 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC1P35251 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC1P35251 DUX4L45-201ENST00000566406 1057 ntBASIC15.32■□□□□ 0.04
RFC1P35251 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 AC064801.2-201ENST00000625052 1303 ntBASIC15.32■□□□□ 0.04
RFC1P35251 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC1P35251 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 MST1P2-201ENST00000457982 2291 ntBASIC15.32■□□□□ 0.04
RFC1P35251 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC1P35251 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 AC244394.1-201ENST00000435000 1665 ntBASIC15.32■□□□□ 0.04
RFC1P35251 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC1P35251 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms