Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AL627223.1-201ENST00000416693 442 ntBASIC12.62□□□□□ -0.39
HLA-DMAP28067 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 MKNK2P1-201ENST00000437526 628 ntBASIC12.62□□□□□ -0.39
HLA-DMAP28067 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AC040169.1-201ENST00000565382 521 ntBASIC12.62□□□□□ -0.39
HLA-DMAP28067 AC000095.1-201ENST00000603208 874 ntBASIC12.62□□□□□ -0.39
HLA-DMAP28067 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 MIR6080-201ENST00000617359 66 ntBASIC12.62□□□□□ -0.39
HLA-DMAP28067 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DMAP28067 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DMAP28067 AC115284.2-201ENST00000624646 2054 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 GPS2P2-201ENST00000430745 888 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 CEND1P1-201ENST00000451006 455 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 KRT18P8-201ENST00000581937 1246 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DMAP28067 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 PI4KAP2-201ENST00000360806 2080 ntBASIC12.61□□□□□ -0.39
HLA-DMAP28067 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DMAP28067 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms