Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.7□□□□□ -0.06
VCLP18206 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VCLP18206 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCLP18206 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.69□□□□□ -0.06
VCLP18206 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.69□□□□□ -0.06
VCLP18206 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 AC079178.1-201ENST00000420915 656 ntBASIC14.69□□□□□ -0.06
VCLP18206 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.69□□□□□ -0.06
VCLP18206 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 C2orf69P2-201ENST00000562032 1123 ntBASIC14.69□□□□□ -0.06
VCLP18206 AP006547.1-201ENST00000563435 692 ntBASIC14.69□□□□□ -0.06
VCLP18206 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.69□□□□□ -0.06
VCLP18206 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VCLP18206 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.69□□□□□ -0.06
VCLP18206 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.69□□□□□ -0.06
VCLP18206 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 Z82170.1-201ENST00000625081 3192 ntBASIC14.69□□□□□ -0.06
VCLP18206 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
VCLP18206 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.69□□□□□ -0.06
VCLP18206 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCLP18206 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 AL138725.1-201ENST00000407347 1314 ntBASIC14.68□□□□□ -0.06
VCLP18206 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.68□□□□□ -0.06
VCLP18206 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCLP18206 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.68□□□□□ -0.06
VCLP18206 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.68□□□□□ -0.06
VCLP18206 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 MIR4741-201ENST00000579822 90 ntBASIC14.68□□□□□ -0.06
VCLP18206 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.68□□□□□ -0.06
VCLP18206 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.68□□□□□ -0.06
VCLP18206 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.68□□□□□ -0.06
VCLP18206 AC073413.1-201ENST00000603927 732 ntBASIC14.68□□□□□ -0.06
VCLP18206 AC009542.2-202ENST00000619004 1067 ntBASIC14.68□□□□□ -0.06
VCLP18206 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VCLP18206 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCLP18206 KRT8P4-201ENST00000509735 1454 ntBASIC14.68□□□□□ -0.06
VCLP18206 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VCLP18206 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms