Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC11.39□□□□□ -0.59
CD28P10747 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.39□□□□□ -0.59
CD28P10747 AC092299.1-201ENST00000632679 757 ntBASIC11.39□□□□□ -0.59
CD28P10747 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.39□□□□□ -0.59
CD28P10747 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 AC092135.3-201ENST00000624151 1846 ntBASIC11.39□□□□□ -0.59
CD28P10747 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 DMBT1P1-203ENST00000636837 4628 ntBASIC11.39□□□□□ -0.59
CD28P10747 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 AL031595.1-201ENST00000623969 4709 ntBASIC11.38□□□□□ -0.59
CD28P10747 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.38□□□□□ -0.59
CD28P10747 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 FRMPD2B-201ENST00000431305 1347 ntBASIC11.38□□□□□ -0.59
CD28P10747 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 AC018629.1-201ENST00000623381 1736 ntBASIC11.38□□□□□ -0.59
CD28P10747 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.38□□□□□ -0.59
CD28P10747 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 OR2K2-202ENST00000374428 1038 ntBASIC11.38□□□□□ -0.59
CD28P10747 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CD28P10747 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 RPL8P2-201ENST00000430538 502 ntBASIC11.38□□□□□ -0.59
CD28P10747 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 AC019193.1-201ENST00000506678 823 ntBASIC11.38□□□□□ -0.59
CD28P10747 LY6E-208ENST00000520531 490 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.38□□□□□ -0.59
CD28P10747 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CD28P10747 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CD28P10747 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.38□□□□□ -0.59
CD28P10747 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD28P10747 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.37□□□□□ -0.59
CD28P10747 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.37□□□□□ -0.59
CD28P10747 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CD28P10747 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CD28P10747 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.37□□□□□ -0.59
CD28P10747 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.37□□□□□ -0.59
CD28P10747 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CD28P10747 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CD28P10747 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD28P10747 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms