Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.91□□□□□ -0.66
SMIM17P0DL12 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AL357140.3-201ENST00000639753 1983 ntBASIC10.91□□□□□ -0.66
SMIM17P0DL12 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 AC009093.7-201ENST00000623853 1223 ntBASIC10.91□□□□□ -0.66
SMIM17P0DL12 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMIM17P0DL12 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SMIM17P0DL12 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 KRT8P24-201ENST00000560290 1559 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AL157414.3-201ENST00000624276 1954 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC016397.2-201ENST00000624848 1985 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms