Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.34□□□□□ -0.11
RBP1P09455 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 AC073548.1-201ENST00000624088 1882 ntBASIC14.34□□□□□ -0.11
RBP1P09455 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 AC098614.1-201ENST00000368528 745 ntBASIC14.34□□□□□ -0.11
RBP1P09455 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.34□□□□□ -0.11
RBP1P09455 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.34□□□□□ -0.11
RBP1P09455 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.34□□□□□ -0.11
RBP1P09455 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.34□□□□□ -0.11
RBP1P09455 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.34□□□□□ -0.11
RBP1P09455 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.34□□□□□ -0.11
RBP1P09455 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 AC005252.3-201ENST00000623855 2258 ntBASIC14.34□□□□□ -0.11
RBP1P09455 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.33□□□□□ -0.11
RBP1P09455 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBP1P09455 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.33□□□□□ -0.11
RBP1P09455 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBP1P09455 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RBP1P09455 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.33□□□□□ -0.11
RBP1P09455 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBP1P09455 AGAP10P-201ENST00000454844 2418 ntBASIC14.33□□□□□ -0.12
RBP1P09455 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.33□□□□□ -0.12
RBP1P09455 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.33□□□□□ -0.12
RBP1P09455 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 AC007389.4-201ENST00000454674 793 ntBASIC14.33□□□□□ -0.12
RBP1P09455 CICP12-201ENST00000455801 843 ntBASIC14.33□□□□□ -0.12
RBP1P09455 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.33□□□□□ -0.12
RBP1P09455 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.33□□□□□ -0.12
RBP1P09455 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.33□□□□□ -0.12
RBP1P09455 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBP1P09455 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBP1P09455 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RBP1P09455 AC015909.5-201ENST00000624336 2266 ntBASIC14.32□□□□□ -0.12
RBP1P09455 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.32□□□□□ -0.12
RBP1P09455 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 AC105206.1-202ENST00000314927 2368 ntBASIC14.32□□□□□ -0.12
RBP1P09455 FAM90A12P-201ENST00000519497 2375 ntBASIC14.32□□□□□ -0.12
RBP1P09455 FAM90A24P-201ENST00000520792 2369 ntBASIC14.32□□□□□ -0.12
RBP1P09455 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
RBP1P09455 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.32□□□□□ -0.12
RBP1P09455 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBP1P09455 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RBP1P09455 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms