Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP2P08253 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.53□□□□□ -0.08
MMP2P08253 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.53□□□□□ -0.08
MMP2P08253 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.53□□□□□ -0.08
MMP2P08253 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
MMP2P08253 AL645939.5-201ENST00000606834 243 ntBASIC14.53□□□□□ -0.08
MMP2P08253 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP2P08253 BAP1-211ENST00000615113 489 ntBASIC14.53□□□□□ -0.08
MMP2P08253 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MMP2P08253 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MMP2P08253 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MMP2P08253 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP2P08253 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 AC005840.4-201ENST00000541242 2494 ntBASIC14.53□□□□□ -0.08
MMP2P08253 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP2P08253 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MMP2P08253 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP2P08253 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP2P08253 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 AC007952.5-201ENST00000572818 1486 ntBASIC14.52□□□□□ -0.08
MMP2P08253 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
MMP2P08253 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MMP2P08253 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.52□□□□□ -0.09
MMP2P08253 AC125604.1-201ENST00000496255 707 ntBASIC14.52□□□□□ -0.09
MMP2P08253 RCC2P8-201ENST00000502779 1035 ntBASIC14.52□□□□□ -0.09
MMP2P08253 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.52□□□□□ -0.09
MMP2P08253 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP2P08253 AC140658.4-201ENST00000561990 352 ntBASIC14.52□□□□□ -0.09
MMP2P08253 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.52□□□□□ -0.09
MMP2P08253 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MMP2P08253 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MMP2P08253 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MMP2P08253 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP2P08253 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.52□□□□□ -0.09
MMP2P08253 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.52□□□□□ -0.09
MMP2P08253 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MMP2P08253 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
MMP2P08253 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
MMP2P08253 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MMP2P08253 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.51□□□□□ -0.09
MMP2P08253 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.51□□□□□ -0.09
MMP2P08253 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.51□□□□□ -0.09
MMP2P08253 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MMP2P08253 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms