Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 KRT8P24-201ENST00000560290 1559 ntBASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AC104073.2-201ENST00000453737 312 ntBASIC14.68□□□□□ -0.06
HLA-DQB2P05538 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AC090164.2-201ENST00000611487 516 ntBASIC14.68□□□□□ -0.06
HLA-DQB2P05538 AC092299.1-201ENST00000632679 757 ntBASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DQB2P05538 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 DPM3-202ENST00000368399 517 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ACTBP11-201ENST00000436287 1126 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 XBP1P1-201ENST00000436573 652 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 SERPINA13P-202ENST00000478994 924 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 AC090386.2-201ENST00000623010 1039 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms