Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC138466.3-201ENST00000619983 221 ntBASIC12.95□□□□□ -0.34
APOC1P02654 AC132938.4-201ENST00000623835 848 ntBASIC12.95□□□□□ -0.34
APOC1P02654 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 AC015688.4-201ENST00000580780 1647 ntBASIC12.95□□□□□ -0.34
APOC1P02654 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 CICP16-201ENST00000502609 2813 ntBASIC12.94□□□□□ -0.34
APOC1P02654 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC1P02654 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC1P02654 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.94□□□□□ -0.34
APOC1P02654 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC1P02654 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.94□□□□□ -0.34
APOC1P02654 PPT1-213ENST00000641319 2388 ntBASIC12.94□□□□□ -0.34
APOC1P02654 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC1P02654 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC1P02654 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 TCAM1P-207ENST00000485295 1537 ntBASIC12.93□□□□□ -0.34
APOC1P02654 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 AC136759.1-202ENST00000530858 2194 ntBASIC12.93□□□□□ -0.34
APOC1P02654 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms