Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GOLGA2P8-201ENST00000505201 779 ntBASIC6.24□□□□□ -1.41
USH2AO75445 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC6.24□□□□□ -1.41
USH2AO75445 BIN3-212ENST00000640731 450 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 FES-203ENST00000394302 2133 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 NAA10-205ENST00000393712 908 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 MRPS16P3-201ENST00000415961 374 ntBASIC6.24□□□□□ -1.41
USH2AO75445 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 AC092865.2-201ENST00000439409 971 ntBASIC6.24□□□□□ -1.41
USH2AO75445 AC116347.1-201ENST00000442824 720 ntBASIC6.24□□□□□ -1.41
USH2AO75445 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC6.24□□□□□ -1.41
USH2AO75445 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 ADK-205ENST00000539909 1866 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 AL391903.1-201ENST00000407513 365 ntBASIC6.24□□□□□ -1.41
USH2AO75445 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC6.24□□□□□ -1.41
USH2AO75445 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 KRT19P4-201ENST00000443208 943 ntBASIC6.24□□□□□ -1.41
USH2AO75445 RN7SL148P-201ENST00000467120 279 ntBASIC6.24□□□□□ -1.41
USH2AO75445 RN7SL111P-201ENST00000468841 285 ntBASIC6.24□□□□□ -1.41
USH2AO75445 FPGT-205ENST00000482102 561 ntTSL 4 BASIC6.24□□□□□ -1.41
USH2AO75445 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC6.24□□□□□ -1.41
USH2AO75445 AC023051.2-201ENST00000541141 460 ntBASIC6.24□□□□□ -1.41
USH2AO75445 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC6.24□□□□□ -1.41
USH2AO75445 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 KRT18P40-201ENST00000599859 1571 ntBASIC6.24□□□□□ -1.41
USH2AO75445 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
USH2AO75445 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USH2AO75445 LINC02486-201ENST00000604157 3000 ntBASIC6.23□□□□□ -1.41
USH2AO75445 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 ABCD1P4-201ENST00000399687 604 ntBASIC6.23□□□□□ -1.41
USH2AO75445 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC6.23□□□□□ -1.41
USH2AO75445 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC6.23□□□□□ -1.41
USH2AO75445 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC6.23□□□□□ -1.41
USH2AO75445 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 AC063977.2-201ENST00000601996 421 ntBASIC6.23□□□□□ -1.41
USH2AO75445 U62317.4-201ENST00000609758 448 ntBASIC6.23□□□□□ -1.41
USH2AO75445 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USH2AO75445 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC6.23□□□□□ -1.41
USH2AO75445 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC6.23□□□□□ -1.41
USH2AO75445 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 MED11-203ENST00000575284 652 ntTSL 3 BASIC6.23□□□□□ -1.41
USH2AO75445 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
USH2AO75445 RN7SL5P-201ENST00000581458 321 ntBASIC6.23□□□□□ -1.41
USH2AO75445 snoZ6.3-201ENST00000583496 76 ntBASIC6.23□□□□□ -1.41
USH2AO75445 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 COG6-212ENST00000630730 186 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 AC018529.2-202ENST00000611482 3087 ntBASIC6.23□□□□□ -1.41
USH2AO75445 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 STRN-202ENST00000379213 2254 ntTSL 5 BASIC6.23□□□□□ -1.41
USH2AO75445 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USH2AO75445 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms