Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC138028.6-201ENST00000616106 1482 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 LINC00115-201ENST00000473798 1317 ntBASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 HMGA1P1-201ENST00000415560 1062 ntBASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 SCARNA20.5-201ENST00000516991 142 ntBASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC020914.3-201ENST00000594712 304 ntBASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV5-4A0A0C4DH59 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL008707.1-201ENST00000422498 534 ntBASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC244452.3-201ENST00000636814 210 ntBASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC020907.1-201ENST00000616460 1350 ntBASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 RPL13AP3-202ENST00000494676 1473 ntBASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV5-4A0A0C4DH59 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms