Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.69■□□□□ 0.9
TPRKBQ9Y3C4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPRKBQ9Y3C4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPRKBQ9Y3C4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPRKBQ9Y3C4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TPRKBQ9Y3C4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRKBQ9Y3C4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRKBQ9Y3C4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRKBQ9Y3C4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPRKBQ9Y3C4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 AC025884.2-201ENST00000553429 711 ntBASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 DUX4L11-201ENST00000611504 1267 ntBASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 DUX4L12-201ENST00000614593 1267 ntBASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 DUX4L14-201ENST00000621227 1267 ntBASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.64■□□□□ 0.89
TPRKBQ9Y3C4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 AL137060.1-201ENST00000618151 2648 ntBASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 AL161729.1-201ENST00000604104 1402 ntBASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
TPRKBQ9Y3C4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRKBQ9Y3C4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TPRKBQ9Y3C4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.6■□□□□ 0.89
TPRKBQ9Y3C4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPRKBQ9Y3C4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.6■□□□□ 0.89
TPRKBQ9Y3C4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPRKBQ9Y3C4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms