Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HHLA3Q9XRX5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.49■□□□□ 0.23
HHLA3Q9XRX5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 AC010980.1-201ENST00000587192 1142 ntBASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HHLA3Q9XRX5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 AC090877.2-201ENST00000558441 1738 ntBASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HHLA3Q9XRX5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HHLA3Q9XRX5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HHLA3Q9XRX5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 AC007375.3-201ENST00000600936 2314 ntBASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HHLA3Q9XRX5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 LINC00526-201ENST00000581067 1875 ntBASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 SLC25A24-204ENST00000569674 2357 ntBASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HHLA3Q9XRX5 AC127496.7-201ENST00000625110 1798 ntBASIC16.43■□□□□ 0.22
HHLA3Q9XRX5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HHLA3Q9XRX5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.43■□□□□ 0.22
HHLA3Q9XRX5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HHLA3Q9XRX5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.43■□□□□ 0.22
HHLA3Q9XRX5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms