Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
UBQLN1Q9UMX0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
UBQLN1Q9UMX0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 C17orf82-201ENST00000623772 1530 ntBASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
UBQLN1Q9UMX0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBQLN1Q9UMX0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
UBQLN1Q9UMX0 AC110285.6-201ENST00000617652 491 ntBASIC24.44■■□□□ 1.5
UBQLN1Q9UMX0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
UBQLN1Q9UMX0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
UBQLN1Q9UMX0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
UBQLN1Q9UMX0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 AC092171.4-201ENST00000609130 632 ntBASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBQLN1Q9UMX0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
UBQLN1Q9UMX0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.4■■□□□ 1.5
UBQLN1Q9UMX0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBQLN1Q9UMX0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.4■■□□□ 1.5
UBQLN1Q9UMX0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBQLN1Q9UMX0 DUX4L19-201ENST00000557448 1267 ntBASIC24.39■■□□□ 1.49
UBQLN1Q9UMX0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
UBQLN1Q9UMX0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
UBQLN1Q9UMX0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
UBQLN1Q9UMX0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 UNC93B3-201ENST00000308076 687 ntBASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 AC004812.2-201ENST00000611079 2094 ntBASIC24.38■■□□□ 1.49
UBQLN1Q9UMX0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 MIR638-201ENST00000385237 100 ntBASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 AC099791.2-201ENST00000605725 427 ntBASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 AC241377.3-202ENST00000626088 1088 ntBASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 AC241585.3-202ENST00000628937 1088 ntBASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 AC245100.8-202ENST00000629247 1058 ntBASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBQLN1Q9UMX0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBQLN1Q9UMX0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.35■■□□□ 1.49
UBQLN1Q9UMX0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 SYT6-210ENST00000641643 1587 ntBASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms