Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COMMD3Q9UBI1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
COMMD3Q9UBI1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3Q9UBI1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3Q9UBI1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3Q9UBI1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 AC242852.2-201ENST00000615738 1807 ntBASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD3Q9UBI1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COMMD3Q9UBI1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 SLC25A24-204ENST00000569674 2357 ntBASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COMMD3Q9UBI1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.85■□□□□ 0.77
COMMD3Q9UBI1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
COMMD3Q9UBI1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms