Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SNX5-217ENST00000606557 1087 ntBASIC21■□□□□ 0.95
POLE3Q9NRF9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
POLE3Q9NRF9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLE3Q9NRF9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21■□□□□ 0.95
POLE3Q9NRF9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
POLE3Q9NRF9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLE3Q9NRF9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21■□□□□ 0.95
POLE3Q9NRF9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
POLE3Q9NRF9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLE3Q9NRF9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 ANOS2P-203ENST00000472227 1816 ntBASIC20.98■□□□□ 0.95
POLE3Q9NRF9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLE3Q9NRF9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
POLE3Q9NRF9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
POLE3Q9NRF9 AC021242.3-201ENST00000607598 1377 ntBASIC20.97■□□□□ 0.95
POLE3Q9NRF9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
POLE3Q9NRF9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLE3Q9NRF9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.94■□□□□ 0.94
POLE3Q9NRF9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLE3Q9NRF9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
POLE3Q9NRF9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 Z92544.1-202ENST00000571933 1220 ntBASIC20.92■□□□□ 0.94
POLE3Q9NRF9 MIR6722-201ENST00000617286 78 ntBASIC20.92■□□□□ 0.94
POLE3Q9NRF9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms