Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TLR9Q9NR96 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TLR9Q9NR96 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
TLR9Q9NR96 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.22■■□□□ 1.47
TLR9Q9NR96 AC126544.1-201ENST00000580842 1059 ntBASIC24.22■■□□□ 1.47
TLR9Q9NR96 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TLR9Q9NR96 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TLR9Q9NR96 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.21■■□□□ 1.47
TLR9Q9NR96 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TLR9Q9NR96 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TLR9Q9NR96 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.21■■□□□ 1.47
TLR9Q9NR96 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TLR9Q9NR96 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
TLR9Q9NR96 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
TLR9Q9NR96 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.2■■□□□ 1.46
TLR9Q9NR96 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TLR9Q9NR96 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.2■■□□□ 1.46
TLR9Q9NR96 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TLR9Q9NR96 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TLR9Q9NR96 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.2■■□□□ 1.46
TLR9Q9NR96 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.2■■□□□ 1.46
TLR9Q9NR96 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TLR9Q9NR96 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TLR9Q9NR96 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.19■■□□□ 1.46
TLR9Q9NR96 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TLR9Q9NR96 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TLR9Q9NR96 pRNA.6-201ENST00000610482 90 ntBASIC24.19■■□□□ 1.46
TLR9Q9NR96 pRNA.5-201ENST00000612139 90 ntBASIC24.19■■□□□ 1.46
TLR9Q9NR96 pRNA.11-201ENST00000618423 90 ntBASIC24.19■■□□□ 1.46
TLR9Q9NR96 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TLR9Q9NR96 pRNA.13-201ENST00000619112 90 ntBASIC24.19■■□□□ 1.46
TLR9Q9NR96 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TLR9Q9NR96 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TLR9Q9NR96 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.18■■□□□ 1.46
TLR9Q9NR96 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.18■■□□□ 1.46
TLR9Q9NR96 YBX1P1-201ENST00000445822 960 ntBASIC24.18■■□□□ 1.46
TLR9Q9NR96 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.18■■□□□ 1.46
TLR9Q9NR96 RARRES2P11-201ENST00000635158 484 ntBASIC24.18■■□□□ 1.46
TLR9Q9NR96 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TLR9Q9NR96 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TLR9Q9NR96 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TLR9Q9NR96 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TLR9Q9NR96 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.18■■□□□ 1.46
TLR9Q9NR96 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 AC090192.1-201ENST00000517740 490 ntBASIC24.17■■□□□ 1.46
TLR9Q9NR96 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TLR9Q9NR96 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
TLR9Q9NR96 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TLR9Q9NR96 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TLR9Q9NR96 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
TLR9Q9NR96 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.16■■□□□ 1.46
TLR9Q9NR96 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.16■■□□□ 1.46
TLR9Q9NR96 AC022517.1-201ENST00000592429 346 ntBASIC24.16■■□□□ 1.46
TLR9Q9NR96 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TLR9Q9NR96 IKBKGP1-201ENST00000612193 1073 ntBASIC24.16■■□□□ 1.46
TLR9Q9NR96 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TLR9Q9NR96 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.16■■□□□ 1.46
TLR9Q9NR96 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.16■■□□□ 1.46
TLR9Q9NR96 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TLR9Q9NR96 TSPY26P-201ENST00000476365 1326 ntBASIC24.15■■□□□ 1.46
TLR9Q9NR96 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TLR9Q9NR96 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TLR9Q9NR96 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.15■■□□□ 1.46
TLR9Q9NR96 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TLR9Q9NR96 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.14■■□□□ 1.46
TLR9Q9NR96 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TLR9Q9NR96 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TLR9Q9NR96 KRT18P5-201ENST00000436075 1291 ntBASIC24.14■■□□□ 1.45
TLR9Q9NR96 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TLR9Q9NR96 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.14■■□□□ 1.45
TLR9Q9NR96 AL161729.1-201ENST00000604104 1402 ntBASIC24.14■■□□□ 1.45
TLR9Q9NR96 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
TLR9Q9NR96 AL031602.1-201ENST00000633169 911 ntBASIC24.14■■□□□ 1.45
TLR9Q9NR96 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TLR9Q9NR96 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TLR9Q9NR96 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TLR9Q9NR96 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
TLR9Q9NR96 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.13■■□□□ 1.45
TLR9Q9NR96 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.13■■□□□ 1.45
TLR9Q9NR96 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.13■■□□□ 1.45
TLR9Q9NR96 AL137784.2-201ENST00000607332 1000 ntBASIC24.13■■□□□ 1.45
TLR9Q9NR96 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TLR9Q9NR96 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.13■■□□□ 1.45
TLR9Q9NR96 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms