Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.13■□□□□ 0.65
HES4Q9HCC6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.13■□□□□ 0.65
HES4Q9HCC6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HES4Q9HCC6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HES4Q9HCC6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HES4Q9HCC6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.13■□□□□ 0.65
HES4Q9HCC6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HES4Q9HCC6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.12■□□□□ 0.65
HES4Q9HCC6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.12■□□□□ 0.65
HES4Q9HCC6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
HES4Q9HCC6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HES4Q9HCC6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HES4Q9HCC6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HES4Q9HCC6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HES4Q9HCC6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HES4Q9HCC6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 ANOS2P-203ENST00000472227 1816 ntBASIC19.11■□□□□ 0.65
HES4Q9HCC6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 AC092068.2-201ENST00000590491 1708 ntBASIC19.11■□□□□ 0.65
HES4Q9HCC6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HES4Q9HCC6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.11■□□□□ 0.65
HES4Q9HCC6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 AL451085.2-201ENST00000605085 799 ntBASIC19.1■□□□□ 0.65
HES4Q9HCC6 MIR6722-201ENST00000617286 78 ntBASIC19.1■□□□□ 0.65
HES4Q9HCC6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.1■□□□□ 0.65
HES4Q9HCC6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.1■□□□□ 0.65
HES4Q9HCC6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HES4Q9HCC6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 AC009299.2-201ENST00000482477 511 ntBASIC19.09■□□□□ 0.65
HES4Q9HCC6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HES4Q9HCC6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.09■□□□□ 0.65
HES4Q9HCC6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.08■□□□□ 0.65
HES4Q9HCC6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.08■□□□□ 0.65
HES4Q9HCC6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.08■□□□□ 0.65
HES4Q9HCC6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HES4Q9HCC6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HES4Q9HCC6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HES4Q9HCC6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HES4Q9HCC6 KRT125P-201ENST00000546827 989 ntBASIC19.08■□□□□ 0.64
HES4Q9HCC6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.08■□□□□ 0.64
HES4Q9HCC6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HES4Q9HCC6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.08■□□□□ 0.64
HES4Q9HCC6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms