Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.9■■□□□ 1.1
SOX17Q9H6I2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SOX17Q9H6I2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SOX17Q9H6I2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SOX17Q9H6I2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.89■■□□□ 1.09
SOX17Q9H6I2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SOX17Q9H6I2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SOX17Q9H6I2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.88■■□□□ 1.09
SOX17Q9H6I2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.88■■□□□ 1.09
SOX17Q9H6I2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX17Q9H6I2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.87■■□□□ 1.09
SOX17Q9H6I2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.87■■□□□ 1.09
SOX17Q9H6I2 ABCB10P4-201ENST00000566803 2184 ntBASIC21.87■■□□□ 1.09
SOX17Q9H6I2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX17Q9H6I2 AC008406.3-201ENST00000620001 1374 ntBASIC21.87■■□□□ 1.09
SOX17Q9H6I2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SOX17Q9H6I2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX17Q9H6I2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX17Q9H6I2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.85■■□□□ 1.09
SOX17Q9H6I2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.85■■□□□ 1.09
SOX17Q9H6I2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX17Q9H6I2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 MIR6724-1-201ENST00000616420 92 ntBASIC21.84■■□□□ 1.09
SOX17Q9H6I2 MIR6724-2-201ENST00000616483 92 ntBASIC21.84■■□□□ 1.09
SOX17Q9H6I2 MIR6724-4-201ENST00000617390 92 ntBASIC21.84■■□□□ 1.09
SOX17Q9H6I2 MIR6724-3-201ENST00000622482 92 ntBASIC21.84■■□□□ 1.09
SOX17Q9H6I2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX17Q9H6I2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.83■■□□□ 1.09
SOX17Q9H6I2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SOX17Q9H6I2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SOX17Q9H6I2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 SNX5-217ENST00000606557 1087 ntBASIC21.82■■□□□ 1.08
SOX17Q9H6I2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 AC141586.4-201ENST00000624558 1573 ntBASIC21.82■■□□□ 1.08
SOX17Q9H6I2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX17Q9H6I2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 AL117332.1-201ENST00000622628 974 ntBASIC21.81■■□□□ 1.08
SOX17Q9H6I2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX17Q9H6I2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms