Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.26■■□□□ 1.47
CDX2Q99626 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.26■■□□□ 1.47
CDX2Q99626 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.26■■□□□ 1.47
CDX2Q99626 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDX2Q99626 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDX2Q99626 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.26■■□□□ 1.47
CDX2Q99626 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDX2Q99626 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDX2Q99626 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.26■■□□□ 1.47
CDX2Q99626 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDX2Q99626 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDX2Q99626 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.25■■□□□ 1.47
CDX2Q99626 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDX2Q99626 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.25■■□□□ 1.47
CDX2Q99626 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.25■■□□□ 1.47
CDX2Q99626 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CDX2Q99626 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.24■■□□□ 1.47
CDX2Q99626 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.24■■□□□ 1.47
CDX2Q99626 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.24■■□□□ 1.47
CDX2Q99626 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDX2Q99626 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDX2Q99626 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.24■■□□□ 1.47
CDX2Q99626 AC142086.2-201ENST00000569753 217 ntBASIC24.24■■□□□ 1.47
CDX2Q99626 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.24■■□□□ 1.47
CDX2Q99626 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CDX2Q99626 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDX2Q99626 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDX2Q99626 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDX2Q99626 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.23■■□□□ 1.47
CDX2Q99626 MIR663A-201ENST00000385250 93 ntBASIC24.23■■□□□ 1.47
CDX2Q99626 MIR4651-201ENST00000582622 73 ntBASIC24.23■■□□□ 1.47
CDX2Q99626 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDX2Q99626 AC131274.2-201ENST00000580697 1507 ntBASIC24.23■■□□□ 1.47
CDX2Q99626 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDX2Q99626 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDX2Q99626 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDX2Q99626 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDX2Q99626 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.22■■□□□ 1.47
CDX2Q99626 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.22■■□□□ 1.47
CDX2Q99626 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.22■■□□□ 1.47
CDX2Q99626 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CDX2Q99626 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.22■■□□□ 1.47
CDX2Q99626 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.22■■□□□ 1.47
CDX2Q99626 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CDX2Q99626 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.22■■□□□ 1.47
CDX2Q99626 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
CDX2Q99626 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.21■■□□□ 1.47
CDX2Q99626 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.21■■□□□ 1.47
CDX2Q99626 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.21■■□□□ 1.47
CDX2Q99626 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDX2Q99626 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
CDX2Q99626 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDX2Q99626 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CDX2Q99626 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDX2Q99626 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.2■■□□□ 1.47
CDX2Q99626 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.2■■□□□ 1.46
CDX2Q99626 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.2■■□□□ 1.46
CDX2Q99626 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDX2Q99626 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.2■■□□□ 1.46
CDX2Q99626 FAM201B-201ENST00000458407 597 ntBASIC24.2■■□□□ 1.46
CDX2Q99626 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDX2Q99626 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CDX2Q99626 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.2■■□□□ 1.46
CDX2Q99626 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDX2Q99626 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDX2Q99626 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CDX2Q99626 AC008687.6-201ENST00000596318 630 ntBASIC24.19■■□□□ 1.46
CDX2Q99626 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.19■■□□□ 1.46
CDX2Q99626 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDX2Q99626 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDX2Q99626 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDX2Q99626 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.18■■□□□ 1.46
CDX2Q99626 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CDX2Q99626 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CDX2Q99626 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.17■■□□□ 1.46
CDX2Q99626 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDX2Q99626 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.17■■□□□ 1.46
CDX2Q99626 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDX2Q99626 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDX2Q99626 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDX2Q99626 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.17■■□□□ 1.46
CDX2Q99626 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDX2Q99626 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.17■■□□□ 1.46
CDX2Q99626 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDX2Q99626 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDX2Q99626 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDX2Q99626 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.16■■□□□ 1.46
CDX2Q99626 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.16■■□□□ 1.46
CDX2Q99626 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDX2Q99626 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.16■■□□□ 1.46
CDX2Q99626 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CDX2Q99626 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CDX2Q99626 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.15■■□□□ 1.46
CDX2Q99626 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.15■■□□□ 1.46
CDX2Q99626 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.15■■□□□ 1.46
CDX2Q99626 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.15■■□□□ 1.46
CDX2Q99626 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CDX2Q99626 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDX2Q99626 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDX2Q99626 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms