Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CLPTM1LQ96KA5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.78■■□□□ 1.08
CLPTM1LQ96KA5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
CLPTM1LQ96KA5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
CLPTM1LQ96KA5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.78■■□□□ 1.08
CLPTM1LQ96KA5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPTM1LQ96KA5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLPTM1LQ96KA5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLPTM1LQ96KA5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CLPTM1LQ96KA5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPTM1LQ96KA5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.74■■□□□ 1.07
CLPTM1LQ96KA5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CLPTM1LQ96KA5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.72■■□□□ 1.07
CLPTM1LQ96KA5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.71■■□□□ 1.07
CLPTM1LQ96KA5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
CLPTM1LQ96KA5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPTM1LQ96KA5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 SMPD5-203ENST00000639008 1464 ntBASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLPTM1LQ96KA5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLPTM1LQ96KA5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.67■■□□□ 1.06
CLPTM1LQ96KA5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms