Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NAF1Q96HR8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.72■■□□□ 1.23
NAF1Q96HR8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NAF1Q96HR8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.72■■□□□ 1.23
NAF1Q96HR8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
NAF1Q96HR8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NAF1Q96HR8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.72■■□□□ 1.23
NAF1Q96HR8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
NAF1Q96HR8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
NAF1Q96HR8 AC096631.2-201ENST00000436136 790 ntBASIC22.71■■□□□ 1.23
NAF1Q96HR8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NAF1Q96HR8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NAF1Q96HR8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.7■■□□□ 1.22
NAF1Q96HR8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.7■■□□□ 1.22
NAF1Q96HR8 AC005837.3-201ENST00000612163 286 ntBASIC22.7■■□□□ 1.22
NAF1Q96HR8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NAF1Q96HR8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.69■■□□□ 1.22
NAF1Q96HR8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.69■■□□□ 1.22
NAF1Q96HR8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.69■■□□□ 1.22
NAF1Q96HR8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NAF1Q96HR8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NAF1Q96HR8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NAF1Q96HR8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.68■■□□□ 1.22
NAF1Q96HR8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NAF1Q96HR8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.68■■□□□ 1.22
NAF1Q96HR8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.68■■□□□ 1.22
NAF1Q96HR8 KRT18P10-201ENST00000388836 1287 ntBASIC22.68■■□□□ 1.22
NAF1Q96HR8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 AL117332.1-201ENST00000622628 974 ntBASIC22.68■■□□□ 1.22
NAF1Q96HR8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NAF1Q96HR8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NAF1Q96HR8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
NAF1Q96HR8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.67■■□□□ 1.22
NAF1Q96HR8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NAF1Q96HR8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NAF1Q96HR8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 EP400NL-214ENST00000641289 2402 ntBASIC22.66■■□□□ 1.22
NAF1Q96HR8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.66■■□□□ 1.22
NAF1Q96HR8 AC010997.5-201ENST00000609182 354 ntBASIC22.66■■□□□ 1.22
NAF1Q96HR8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NAF1Q96HR8 AP003733.4-201ENST00000623785 1697 ntBASIC22.65■■□□□ 1.22
NAF1Q96HR8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NAF1Q96HR8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NAF1Q96HR8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NAF1Q96HR8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
NAF1Q96HR8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.65■■□□□ 1.22
NAF1Q96HR8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NAF1Q96HR8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NAF1Q96HR8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
NAF1Q96HR8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.64■■□□□ 1.22
NAF1Q96HR8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NAF1Q96HR8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
NAF1Q96HR8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NAF1Q96HR8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NAF1Q96HR8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NAF1Q96HR8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.64■■□□□ 1.21
NAF1Q96HR8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NAF1Q96HR8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.63■■□□□ 1.21
NAF1Q96HR8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms