Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC079834.2-201ENST00000609776 1949 ntBASIC20.27■□□□□ 0.84
LRRC46Q96FV0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 AL355001.2-201ENST00000620617 1191 ntBASIC20.27■□□□□ 0.84
LRRC46Q96FV0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC46Q96FV0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC46Q96FV0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.27■□□□□ 0.83
LRRC46Q96FV0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC46Q96FV0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.25■□□□□ 0.83
LRRC46Q96FV0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRC46Q96FV0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC46Q96FV0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 SYT6-210ENST00000641643 1587 ntBASIC20.23■□□□□ 0.83
LRRC46Q96FV0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC46Q96FV0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC46Q96FV0 AC092803.2-201ENST00000564287 1899 ntBASIC20.22■□□□□ 0.83
LRRC46Q96FV0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 AC024257.2-201ENST00000549699 147 ntBASIC20.21■□□□□ 0.83
LRRC46Q96FV0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC46Q96FV0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRRC46Q96FV0 AL022069.1-201ENST00000568025 1636 ntBASIC20.2■□□□□ 0.82
LRRC46Q96FV0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC46Q96FV0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms