Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
NCLNQ969V3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NCLNQ969V3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NCLNQ969V3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NCLNQ969V3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
NCLNQ969V3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 MIR4281-201ENST00000580852 62 ntBASIC21.82■■□□□ 1.08
NCLNQ969V3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
NCLNQ969V3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLNQ969V3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.81■■□□□ 1.08
NCLNQ969V3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.81■■□□□ 1.08
NCLNQ969V3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NCLNQ969V3 C9orf163-202ENST00000624034 2573 ntBASIC21.81■■□□□ 1.08
NCLNQ969V3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NCLNQ969V3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.81■■□□□ 1.08
NCLNQ969V3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.81■■□□□ 1.08
NCLNQ969V3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NCLNQ969V3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NCLNQ969V3 AC090877.2-201ENST00000558441 1738 ntBASIC21.8■■□□□ 1.08
NCLNQ969V3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NCLNQ969V3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLNQ969V3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NCLNQ969V3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.8■■□□□ 1.08
NCLNQ969V3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.8■■□□□ 1.08
NCLNQ969V3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.8■■□□□ 1.08
NCLNQ969V3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NCLNQ969V3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.8■■□□□ 1.08
NCLNQ969V3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLNQ969V3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NCLNQ969V3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLNQ969V3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.79■■□□□ 1.08
NCLNQ969V3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLNQ969V3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.79■■□□□ 1.08
NCLNQ969V3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NCLNQ969V3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.78■■□□□ 1.08
NCLNQ969V3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NCLNQ969V3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCLNQ969V3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCLNQ969V3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
NCLNQ969V3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLNQ969V3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NCLNQ969V3 BX664725.1-201ENST00000438252 379 ntBASIC21.77■■□□□ 1.08
NCLNQ969V3 AC239859.2-201ENST00000444165 318 ntBASIC21.77■■□□□ 1.08
NCLNQ969V3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLNQ969V3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.77■■□□□ 1.08
NCLNQ969V3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.77■■□□□ 1.08
NCLNQ969V3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCLNQ969V3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
NCLNQ969V3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NCLNQ969V3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
NCLNQ969V3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NCLNQ969V3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 Z92544.1-202ENST00000571933 1220 ntBASIC21.76■■□□□ 1.07
NCLNQ969V3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.76■■□□□ 1.07
NCLNQ969V3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLNQ969V3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 AC079834.2-201ENST00000609776 1949 ntBASIC21.75■■□□□ 1.07
NCLNQ969V3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
NCLNQ969V3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLNQ969V3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms